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TetraCVD: A Temporal-Textual Transformer based Model for Cardiovascular Disease Diagnosis

  • Kailong Lu
  • , Fei Zhao
  • , Penghuan Gu
  • , Haoyan Wang
  • , Tianyi Zang*
  • , Hong Wang*
  • *Corresponding author for this work
  • Harbin Institute of Technology
  • General Hospital of People's Liberation Army

Research output: Chapter in Book/Report/Conference proceedingConference contributionpeer-review

Abstract

Cardiovascular disease (CVD) is one of the leading causes of death globally. There is considerable clinical significance and an emerging need of assisting doctors to diagnose cardiovascular disease and identify the subtype of it, from which doctors can provide different treatments and medications to increase the cure rate. The goal of this paper is to develop a deep learning model to predict cardiovascular disease and classify its subtype, which by handling data from two modalities of time-series vital signs and text report. We propose a temporal-textual transformer based model for cardiovascular disease diagnosis, TetraCVD, to address the challenges of irregular temporal feature extraction and medical long-text feature extraction respectively. TetraCVD is a multimodal deep learning model, consisting of two networks, cvdGNN and cvdHierBERT, as its time-series and language backbones, which leverage knowledge from temporal vital signs and text reports of the individuals respectively. Our results show that TetraCVD achieves promising performance in predicting subtypes of cardiovascular disease using the P18-ECER dataset and obtains state-of-the-art results. This study is among the first efforts that use both time-series vital signs and text report data to predict cardiovascular disease and its subtype. We argue that our approach can be generalized to predict and diagnose other diseases easily, and it can potentially play a significant role in the domain of general disease diagnosis in the future.

Original languageEnglish
Title of host publicationProceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
EditorsXingpeng Jiang, Haiying Wang, Reda Alhajj, Xiaohua Hu, Felix Engel, Mufti Mahmud, Nadia Pisanti, Xuefeng Cui, Hong Song
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages2129-2132
Number of pages4
ISBN (Electronic)9798350337488
DOIs
StatePublished - 2023
Event2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023 - Istanbul, Turkey
Duration: 5 Dec 20238 Dec 2023

Publication series

NameProceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023

Conference

Conference2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023
Country/TerritoryTurkey
CityIstanbul
Period5/12/238/12/23

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Cardiovascular disease
  • Disease prediction
  • Multimodal fusion
  • Text report
  • Vital signs

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