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Structural basis of lysophosphatidylserine receptor GPR174 ligand recognition and activation

  • Jiale Liang
  • , Asuka Inoue*
  • , Tatsuya Ikuta
  • , Ruixue Xia
  • , Na Wang
  • , Kouki Kawakami
  • , Zhenmei Xu
  • , Yu Qian
  • , Xinyan Zhu
  • , Anqi Zhang
  • , Changyou Guo
  • , Zhiwei Huang
  • , Yuanzheng He*
  • *Corresponding author for this work
  • School of Life Science and Technology, Harbin Institute of Technology
  • Tohoku University

Research output: Contribution to journalArticlepeer-review

Abstract

Lysophosphatidylserine (LysoPS) is a lipid mediator that induces multiple cellular responses through binding to GPR174. Here, we present the cryo-electron microscopy (cryo-EM) structure of LysoPS-bound human GPR174 in complex with Gs protein. The structure reveals a ligand recognition mode, including the negatively charged head group of LysoPS forms extensive polar interactions with surrounding key residues of the ligand binding pocket, and the L-serine moiety buries deeply into a positive charged cavity in the pocket. In addition, the structure unveils a partially open pocket on transmembrane domain helix (TM) 4 and 5 for a lateral entry of ligand. Finally, the structure reveals a Gs engaging mode featured by a deep insertion of a helix 5 (αH5) and extensive polar interactions between receptor and αH5. Taken together, the information revealed by our structural study provides a framework for understanding LysoPS signaling and a rational basis for designing LysoPS receptor-targeting drugs.

Original languageEnglish
Article number1012
JournalNature Communications
Volume14
Issue number1
DOIs
StatePublished - Dec 2023
Externally publishedYes

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