TY - GEN
T1 - Learning to Describe for Predicting Zero-shot Drug-Drug Interactions
AU - Zhu, Fangqi
AU - Zhang, Yongqi
AU - Chen, Lei
AU - Qin, Bing
AU - Xu, Ruifeng
N1 - Publisher Copyright:
©2023 Association for Computational Linguistics.
PY - 2023
Y1 - 2023
N2 - Adverse drug-drug interactions (DDIs) can compromise the effectiveness of concurrent drug administration, posing a significant challenge in healthcare. As the development of new drugs continues, the potential for unknown adverse effects resulting from DDIs becomes a growing concern. Traditional computational methods for DDI prediction may fail to capture interactions for new drugs due to the lack of knowledge. In this paper, we introduce a new problem setup as zero-shot DDI prediction that deals with the case of new drugs. Leveraging textual information from online databases like DrugBank and PubChem, we propose an innovative approach TextDDI with a language model-based DDI predictor and a reinforcement learning (RL)-based information selector, enabling the selection of concise and pertinent text for accurate DDI prediction on new drugs. Empirical results show the benefits of the proposed approach on several settings including zero-shot and few-shot DDI prediction, and the selected texts are semantically relevant. Our code and data are available at https://github.com/zhufq00/DDIs-Prediction.
AB - Adverse drug-drug interactions (DDIs) can compromise the effectiveness of concurrent drug administration, posing a significant challenge in healthcare. As the development of new drugs continues, the potential for unknown adverse effects resulting from DDIs becomes a growing concern. Traditional computational methods for DDI prediction may fail to capture interactions for new drugs due to the lack of knowledge. In this paper, we introduce a new problem setup as zero-shot DDI prediction that deals with the case of new drugs. Leveraging textual information from online databases like DrugBank and PubChem, we propose an innovative approach TextDDI with a language model-based DDI predictor and a reinforcement learning (RL)-based information selector, enabling the selection of concise and pertinent text for accurate DDI prediction on new drugs. Empirical results show the benefits of the proposed approach on several settings including zero-shot and few-shot DDI prediction, and the selected texts are semantically relevant. Our code and data are available at https://github.com/zhufq00/DDIs-Prediction.
UR - https://www.scopus.com/pages/publications/85184799804
U2 - 10.18653/v1/2023.emnlp-main.918
DO - 10.18653/v1/2023.emnlp-main.918
M3 - 会议稿件
AN - SCOPUS:85184799804
T3 - EMNLP 2023 - 2023 Conference on Empirical Methods in Natural Language Processing, Proceedings
SP - 14855
EP - 14870
BT - EMNLP 2023 - 2023 Conference on Empirical Methods in Natural Language Processing, Proceedings
A2 - Bouamor, Houda
A2 - Pino, Juan
A2 - Bali, Kalika
PB - Association for Computational Linguistics (ACL)
T2 - 2023 Conference on Empirical Methods in Natural Language Processing, EMNLP 2023
Y2 - 6 December 2023 through 10 December 2023
ER -