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gutMDisorder v2.0: a comprehensive database for dysbiosis of gut microbiota in phenotypes and interventions

  • Changlu Qi
  • , Yiting Cai
  • , Kai Qian
  • , Xuefeng Li
  • , Jialiang Ren
  • , Ping Wang
  • , Tongze Fu
  • , Tianyi Zhao
  • , Liang Cheng*
  • , Lei Shi*
  • , Xue Zhang*
  • *Corresponding author for this work
  • Harbin Medical University
  • School of Medicine and Health, Harbin Institute of Technology
  • Chinese Academy of Medical Sciences

Research output: Contribution to journalArticlepeer-review

Abstract

Gut microbiota plays a significant role in maintaining host health, and conversely, disorders potentially lead to dysbiosis, an imbalance in the composition of the gut microbial community. Intervention approaches, such as medications, diets, and several others, also alter the gut microbiota in either a beneficial or harmful direction. In 2020, the gutMDisorder was developed to facilitate researchers in the investigation of dysbiosis of gut microbes as occurs in various disorders as well as with therapeutic interventions. The database has been updated this year, following revision of previous publications and newly published reports to manually integrate confirmed associations under multitudinous conditions. Additionally, the microbial contents of downloaded gut microbial raw sequencing data were annotated, the metadata of the corresponding hosts were manually curated, and the interactive charts were developed to enhance visualization. The improvements have assembled into gutMDisorder v2.0, a more advanced search engine and an upgraded web interface, which can be freely accessed via http://bio-annotation.cn/gutMDisorder/.

Original languageEnglish
Pages (from-to)D717-D722
JournalNucleic Acids Research
Volume51
Issue number1
DOIs
StatePublished - 6 Jan 2023
Externally publishedYes

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