Abstract
Brain decoding is a key neuroscience field that reconstructs the visual stimuli from brain activity with fMRI, which helps illuminate how the brain represents the world. fMRI-to-image reconstruction has achieved impressive progress by leveraging diffusion models. However, brain signals infused with prior knowledge and associations exhibit a significant information asymmetry when compared to raw visual features, still posing challenges for decoding fMRI representations under the supervision of images. Consequently, the reconstructed images often lack fine-grained visual fidelity, such as missing attributes and distorted spatial relationships. To tackle this challenge, we propose BrainCognizer, a novel brain decoding model inspired by human visual cognition, which explores multilevel semantics and correlations without fine-tuning of generative models. Specifically, BrainCognizer introduces two modules: the Cognitive Integration Module which incorporates prior human knowledge to extract hierarchical region semantics; and the Cognitive Correlation Module which captures contextual semantic relationships across regions. Incorporating these two modules enhances intra-region semantic consistency and maintains interregion contextual associations, thereby facilitating fine-grained brain decoding. Moreover, we quantitatively interpret our components from a neuroscience perspective and analyze the associations between different visual patterns and brain functions. Extensive quantitative and qualitative experiments demonstrate that BrainCognizer outperforms state-of-the-art approaches on multiple evaluation metrics. Our code is released publicly at https://github.com/Grace160/BrainCognizer.
| Original language | English |
|---|---|
| Title of host publication | Proceedings - 2025 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2025 |
| Editors | Juan Liu, Jingshan Huang, Xiaowo Wang, Fa Zhang, Xiufen Zou, Tian Tian, Xiaohua Hu, Bin Hu, Yi Xiong |
| Publisher | Institute of Electrical and Electronics Engineers Inc. |
| Pages | 2831-2838 |
| Number of pages | 8 |
| ISBN (Electronic) | 9798331515577 |
| DOIs | |
| State | Published - 2025 |
| Externally published | Yes |
| Event | 2025 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2025 - Wuhan, China Duration: 15 Dec 2025 → 18 Dec 2025 |
Publication series
| Name | Proceedings - 2025 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2025 |
|---|
Conference
| Conference | 2025 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2025 |
|---|---|
| Country/Territory | China |
| City | Wuhan |
| Period | 15/12/25 → 18/12/25 |
UN SDGs
This output contributes to the following UN Sustainable Development Goals (SDGs)
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SDG 3 Good Health and Well-being
Keywords
- Brain decoding
- Human visual cognition
- Latent diffusion model
- fMRI-to-Image reconstruction
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