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A survey on computational methods in discovering protein inhibitors of SARS-CoV-2

  • Qiaoming Liu
  • , Jun Wan*
  • , Guohua Wang*
  • *Corresponding author for this work
  • Northeast Forestry University
  • Indiana University Indianapolis
  • Indiana University-Purdue University Indianapolis

Research output: Contribution to journalReview articlepeer-review

Abstract

The outbreak of acute respiratory disease in 2019, namely Coronavirus Disease-2019 (COVID-19), has become an unprecedented healthcare crisis. To mitigate the pandemic, there are a lot of collective and multidisciplinary efforts in facilitating the rapid discovery of protein inhibitors or drugs against COVID-19. Although many computational methods to predict protein inhibitors have been developed [1- 5], few systematic reviews on these methods have been published. Here, we provide a comprehensive overview of the existing methods to discover potential inhibitors of COVID-19 virus, so-called severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). First, we briefly categorize and describe computational approaches by the basic algorithms involved in. Then we review the related biological datasets used in such predictions. Furthermore, we emphatically discuss current knowledge on SARS-CoV-2 inhibitors with the latest findings and development of computational methods in uncovering protein inhibitors against COVID-19.

Original languageEnglish
Article numberbbab416
JournalBriefings in Bioinformatics
Volume23
Issue number1
DOIs
StatePublished - 1 Jan 2022
Externally publishedYes

Keywords

  • COVID-19
  • SARS-CoV-2
  • antiviral drugs
  • computer-aid drug design
  • inhibitors
  • therapeutics

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